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The 37 Best Gluten-Free Bakeries in San Francisco

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By Gluten Free Eats' gluten-free community

Updated Jun 2025

01
Mariposa Baking Company

Mariposa Baking Company

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100% Dedicated Gluten-Free

1 Ferry Plaza, San Francisco, CA 94111, USA

GF OptionsBagelsDedicated GF MenuVegan Friendly100% Gluten FreeBakery100% GF RestaurantDedicated GF Kitchen SpaceVegetarian OptionsSeparate OvenKnowledgeable StaffDessertsCeliac Friendly100% GFBreakfastCafeDeliveryTake AwayBread Items

Discover an extraordinary gem with an amazing variety of baked goods that will surprise your taste buds and keep you coming back for more!

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Kristie Rolfsen

My croissant loving son was diagnosed with celiac disease in September. I almost cried today watching his happiness as he ate a chocolate croissant at Mariposa’s. 💚

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Dedicated gluten-free menu
02
The Happy Vegan

The Happy Vegan

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100% Dedicated Gluten-Free

293 Bayshore Blvd, San Francisco, CA 94124, USA

GF OptionsBagelsCoffeeSandwichesBreakfastDedicated GF Menu100% Gluten Free100% GFSeparate OvenKnowledgeable StaffDedicated GF Kitchen SpaceVegetarian OptionsVegan OptionsDairy Free OptionsDessertsDedicated GF FryerBread ItemsBurgersFriesWaffles / CrepesCeliac FriendlyLunchBrunchBakeryDeliveryTake AwayKid Friendly

An ex-carnivore's paradise serving mind-blowing vegan breakfasts, and don't forget to try the standout omelette.

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John Hoeglund

My absolute favorite brunch spot in SF. Outstanding food entirely gluten free and vegan. Safe for most major allergens.

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Dedicated gluten-free menu
03
Jane The Bakery

Jane The Bakery

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Accommodating

1881 Geary Blvd, San Francisco, CA 94115, USA

GF OptionsDedicated GF Menu100% Gluten FreeBakeryBreakfastBrunchCoffeeDairy Free OptionsVegan OptionsVegetarian OptionsDedicated GF Kitchen SpaceBread ItemsDessertsDeliveryTake Away

Visitors praise this spot for its perfectly baked treats, consistent quality, and an array of tempting options that keep them coming back.

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Michele Ovalle

I was looking for a bakery with gluten free options and this bakery nailed it! The line moved quickly and parking is convenient. I ordered one of every gluten free option. They were so good that I went back the same day to buy more for the road trip down to SoCal. I’ll be back!

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Dedicated gluten-free menu
04
Arizmendi Bakery

Arizmendi Bakery

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Accommodating

1331 9th Ave, San Francisco, CA 94122, USA

BreakfastBakeryCafeDeliveryTake AwayRestaurant

This neighborhood bakery features a self-service approach with long lines for a reason—fresh, delicious baked goods and a rotating menu await!

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ベーレーンスエメラルド

Gluten-free scones and pastry w/ English clotted cream and cheese for sale.

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GF options marked
05
Le Marais Bakery

Le Marais Bakery

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Accommodating

498 Sanchez St, San Francisco, CA 94114, USA

GF OptionsBakeryCoffeeBrunchBreakfastLunchDeliveryFrenchPet FriendlyOutdoor SeatingKid Friendly

Charming bakery known for delightful galettes and cozy vibes, making it a perfect stop during your Bay Area adventures.

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