Top 17 Gluten-Free Bakeries to Explore in Japan

2-chōme-7-6 Nishiasakusa, Taito City, Tokyo 111-0035, Japan
Gluten Free Icon100% Dedicated Gluten-Free
PizzaVegan OptionsAllergen FriendlyBakeryCoffeeDairy Free OptionsKid FriendlyLunch
This tiny, cozy cafe offers a charming, intimate atmosphere ideal for those seeking a warm, welcoming spot. The air conditioning provides a cool respite, enhancing comfort. It's a delightful discovery for the gluten-free community, with a neat, pleasant setting perfect for enjoying a relaxing visit.
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5-chōme-16-5 Jingūmae, Shibuya City, Tokyo 150-0001, Japan
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100% GFSeparate GF MenuSeparate OvenKnowledgeable StaffDedicated GF Kitchen SpaceBakeryLunchBread Items
Charming bakery with delicious gluten-free pizzas and a safe celiac-friendly menu in a peaceful setting.
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Japan, 〒540-0034 Osaka, Chuo Ward, Shimamachi, 2-chōme−2−3 101
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CoffeeBreakfastGF MenuAsian100% GF RestaurantDedicated GF Kitchen SpaceLunchSandwiches
This cozy, minimalist cafe offers a safe and inviting atmosphere for gluten-free dining, with a small space that fosters a warm, attentive service. Guests can enjoy watching food preparation in a clean setting, making it a hidden gem for gluten-sensitive visitors seeking comfort and care.
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7-chōme-19-12 Okusawa, Setagaya City, Tokyo 158-0083, Japan
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SmoothiesBakeryLunchBread ItemsDessertsSandwiches100% GFDelivery
This small, cozy bakery offers a welcoming haven for coeliac guests with a completely gluten-free menu. Its casual, stylish atmosphere and allergy-labeled products create a safe, comfortable space for those seeking delicious gluten-free options.
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2-chōme-10-19 Kasuga, Bunkyo City, Tokyo 112-0003, Japan
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BakeryBreakfastBrunchKid FriendlyLunchTake AwayVegan OptionsVegetarian Options
This compact bakery offers a unique gluten-free experience with its luminous shelves showcasing a curated selection of breads made exclusively from rice flour. The small, intimate space invites visitors to explore moist, flavorful gluten-free breads that redefine expectations for those with dietary needs.
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Japan, 〒106-0032 Tokyo, Minato City, Roppongi, 3-chōme−4−16 IDAKIビル
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Allergen FriendlyBrunchCoffeeLunchTake AwayVegetarian OptionsVegan Options100% GF
This cozy, homely atmosphere offers a quiet and peaceful place ideal for those with gluten sensitivities. The staff is extremely knowledgeable about gluten allergies and cross-contamination, providing perfect service in a beautiful, welcoming setting.
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Japan, 〒158-0094 Tokyo, Setagaya City, Tamagawa, 3-chōme−20−1 名川ビル 名川ビル1F
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Allergen FriendlyDairy Free OptionsDinnerKid FriendlyOpen Late NightLunchVegetarian OptionsVegan Options
This cafe offers a cozy, antique-style interior with a British-inspired, slightly dark atmosphere that complements its focus on gluten-free options. The chic exterior and intimate setting make it a wonderful spot for those seeking quality gluten-free breads and sweets in a welcoming environment.
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Japan, 〒920-0961 Ishikawa, Kanazawa, Kōrinbō, 2-chōme−4−26 K2ビル
Gluten Free IconCeliac friendly
SeafoodBurgersVegan OptionsAllergen FriendlyDairy Free OptionsDinnerLunchTake Away
This intimate spot offers a warm, elegant ambiance enhanced by Spanish and jazz music, creating a perfect setting for gluten-free diners. The family-run atmosphere and thoughtful hospitality make it a welcoming choice for those seeking gluten-free options in Kanazawa.
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Japan, 〒181-0013 Tokyo, Mitaka, Shimorenjaku, 1-chōme−17−4 2F
Gluten Free IconCeliac friendly
LunchCafeSandwichesDeliveryTake AwayPet FriendlyOutdoor SeatingBread Items
Nestled near a serene park, this spot offers a wood-grained interior and dog-friendly terrace seats, creating a relaxing atmosphere ideal for those seeking gluten-free dining. Its healthy-oriented menu and carefully crafted ambiance make it a must-visit for gluten-sensitive guests.
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2-chōme-4-22 Ichibanchō, Aoba Ward, Sendai, Miyagi 980-0811, Japan
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BrunchCoffeeLunchSeafoodBread ItemsDessertsDeliveryTake Away
This elegant cafe resembles an art museum with elaborate decorations and a slightly spiritual atmosphere. The calm, classy clientele and cozy setting make it a perfect spot for those seeking a gluten-free dining experience with a unique ambiance.
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Japan, 〒231-0861 Kanagawa, Yokohama, Naka Ward, Motomachi, 4-chōme−171 ポンパドウル元町本店ビル 2階
Gluten Free IconAccommodating Gluten-Free
Vegan OptionsAsianBrunchDairy Free OptionsDinnerKid FriendlyLunchTake Away
This bright, spacious restaurant offers a calming, photo-friendly setting with a clean, white interior. It is renowned for its organic gluten-free pasta and a full vegan menu that caters thoughtfully to gluten-free diners, ensuring a warm, welcoming experience.
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Japan, 〒106-0032 Tokyo, Minato City, Roppongi, 5-chōme−1−11 三共無線六本木ビル
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Vegan OptionsDairy Free OptionsDinnerVegetarian OptionsFriesLunchBrunchDelivery
This cozy spot features a tiny counter often filled with international guests, creating a global vibe that complements its freshly made gluten-free options. The friendly staff strive to clarify gluten-free choices, making it a notable destination for those seeking gluten-free dining in a vibrant, travel-like atmosphere.
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101 2-chōme-12-5 Nakano, Nakano City, Tokyo 164-0001, Japan
Gluten-free options
Allergen FriendlyBakeryBreakfastBrunchCoffeeDairy Free OptionsLunchOutdoor Seating
This cafe offers a warm, nostalgic interior that feels like a secret hideout, inviting guests to unwind in a home-like atmosphere where shoes are removed and strollers left outside. It specializes in gluten-free delights like moist rice flour tatin cake and crispy yet chewy rice flour baguettes, ensuring a safe and delicious experience for gluten-sensitive guests.
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9-1 Motohakone, Hakone, Ashigarashimo District, Kanagawa 250-0522, Japan
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BakeryCafeDeliveryTake AwayBread Items
Set on a serene lake shore, this stylish bakery offers a beautiful panoramic view and a relaxing atmosphere with a unique foot bath terrace. While gluten-free options are currently unavailable, the spacious café and tranquil setting provide a peaceful retreat for all visitors.
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2277 Hirao, Yamanochi, Shimotakai District, Nagano 381-0401, Japan
Gluten-free options
CafeBread ItemsBarRestaurant
This cozy ryokan features traditional Japanese-style rooms with spacious tatami mats and futons, creating a serene setting ideal for guests with gluten sensitivities. The relaxing ambiance with jazz music and attentive service ensure a comfortable stay, with staff incredibly accommodating of gluten and nut allergies.
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73 Renpeichō, Chuo Ward, Kumamoto, 860-0017, Japan
Gluten-free options
DinnerMexicanCocktailsTacosDeliveryTake AwayBread Items
Cozy eatery with authentic Mexican tacos and gluten-free options including Tacos Maza and Aztec soup.
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Japan, 〒150-0001 Tokyo, Shibuya City, Jingūmae, 1-chōme−20−4 Axia原宿 307
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Vegan OptionsGF Menu100% GF RestaurantDedicated GF Kitchen SpaceBakeryBreakfastBrunchCoffee
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