Atly Logo

The 50 Best Gluten-Free Cafés in Japan

Gluten Free UsersGluten Free UsersGluten Free Users
2k+

By Gluten Free Eats' gluten-free community

Updated Jul 2025

01
Gluten Free T’s Kitchen

Gluten Free T’s Kitchen

Gluten Free Icon

100% Dedicated Gluten-Free

藤和 六本木 コープ Ⅱ ロック & ロック ビル 2F, 7丁目-8-5 六本木 港区 東京都 106-0032, Japan

Dedicated GF MenuVegan Friendly100% Gluten Free100% GF RestaurantDinnerCasualAllergen FriendlyCeliac Friendly100% GFRestaurantAsianLunchBrunchCafeDeliveryTake AwayOutdoor SeatingKid FriendlyVegetarian
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more
02
Ain Soph. Journey Shinjuku

Ain Soph. Journey Shinjuku

Gluten Free Icon

Accommodating

Japan, 〒160-0022 Tokyo, Shinjuku City, Shinjuku, 3-chōme−8−9 新宿Qビル 4F

GF OptionsLunchDinnerBrunchVeganCafeDeliveryVegetarianRestaurant
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more

¥1,980- Heavenly vegan pancakes♡ Gluten-free pancakes! Fluffy and moist. Enjoy it with seasonal fruits, whipped soy milk, and homemade vanilla ice cream. The soy milk cream was more delicious than I expected. 100% vegan🌱 is amazing!

Gluten Free Menu Icon
Gluten-free options are marked
03
Shochikuen Cafe

Shochikuen Cafe

Gluten Free Icon

100% Dedicated Gluten-Free

2-chōme-7-6 Nishiasakusa, Taito City, Tokyo 111-0035, Japan

PizzaVegan OptionsGF OptionsAllergen FriendlyBakeryCoffeeDairy Free OptionsKid FriendlyLunchTake AwayVegetarian OptionsBread ItemsBurgersDesserts100% GFCeliac FriendlyBreakfastDinnerBrunchDeliveryPet Friendly
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more

Fun little vegan and gluten-free cafe. The staff working were friendly and kind. It is a small place and the serves are to the smaller side, too. Maybe more of a snack and treat spot I’d say. We came for lunch and had a pizza and burger plus cake and smoothies and drinks and weren’t full after. The rainbow cake looks beautiful, but wasn’t too flavorful. Tiramisu was more enjoyable. Great alternative cafe if on the search for gluten-free and vegan or dairyfree sweat and savory treats!

Gluten Free Menu Icon
Dedicated gluten-free menu
04
waco crepes

waco crepes

Gluten Free Icon

100% Dedicated Gluten-Free

6-chōme-355-1 Miyagawasuji, Higashiyama Ward, Kyoto, 605-0801, Japan

Dedicated GF MenuVegan Friendly100% Gluten FreeVegetarian OptionsWaffles / CrepesBeerDessertsLunchCafeBrunchAllergen FriendlyDairy FreeOutdoor SeatingTake AwayKid FriendlyCeliac Friendly100% GFDedicated GF FryerBreakfastDeliveryRestaurant
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more
Profile Image
Mel Griffin

Amazing. We ordered two savory and two sweet crepes and their matcha lattes. Everything was delicious and the staff is so friendly. The place is small so go early for seats.

Gluten Free Menu Icon
Dedicated gluten-free menu
05
Rizlabo Kitchen

Rizlabo Kitchen

Gluten Free Icon

Celiac friendly

4-chōme-15-2 Jingūmae, Shibuya City, Tokyo 150-0001, Japan

GF OptionsCeliac FriendlyDessertsPancakesRestaurantCafeKid FriendlyLunchBrunchDeliveryTake AwayPet FriendlyOutdoor SeatingDedicated GF Fryer
Gluten Free Users
Gluten Free Users
Gluten Free Users
Learn more

This is heaven for any gluten intolerant. I was amazed by their pancakes and sweet staff. Will book a new trip to Japan just to eat here again❤️

Gluten Free Menu Icon
Gluten-free options are marked