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The 50 Best Gluten-Free Grocery Stores in Wisconsin

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By Gluten Free Eats' gluten-free community

Updated Jul 2025

01
Trader Joe's

Trader Joe's

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5600 N Port Washington Rd, Glendale, WI 53217, USA

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Lex Lynne

A must go, in Milwaukee. I love shopping at Trader Joe's. I make a stop every time I'm in the area. I love their selection of allergen free foods. I also love how kind the associates are. The shelves are neatly stocked. The store is super clean and has a great atmosphere. Their signature items are so clean and tasty. I'm addicted to their Gluten free muffins, toffee (especially the pistachio variety), Also really obsessed with the sunbutter cups. Another favorite is the matcha and chai tea mints. I love that their products are dye free and sustainable ingredients. I could go on and on!

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02
Trader Joe's

Trader Joe's

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716 Harrison St, Madison, WI 53711, USA

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I rarely shop here but will start shopping here more after yesterday! I some how dropped my cell phone out of my purse. The manager was so helpful and called an associate to help me look. They even let me use their phone to call my husband to let him know I lost my phone. The associate tried calling my phone to see if we could hear it. They finally took my husband's number and my name to see if someone might find it later. On the way back to my car, I noticed the sun shining off something in the snowbank. It was my phone! I was in a full blown panic attack when this happened. It was my phone! The staff at this location makes it worth going. I felt heard and cared for. They also have such good products which is why I was there in the first place. I needed to get some gluten free items. Thank you so much for making my day manageable and all the help the manager and associates gave me not only with trying to find my phone but showing me where the gluten free crackers were and telling me all about the different ones Trader Joe's carries!

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03
Good Harvest Market

Good Harvest Market

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2205 Silvernail Rd, Pewaukee, Wisconsin, United States

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Rachel Pader

I recently ordered a gluten-free, dairy-free cake from Good Harvest, and I couldn't be more thrilled with the results! From the moment I placed my order, the communication was excellent, and they took the time to understand my preferences and dietary needs. When the cake was ready for pick up, I was amazed by its beautiful presentation. It looked almost too good to eat! But the best part was the taste. The cake was incredibly moist, rich, and flavorful—definitely one of the best desserts I've ever had. It was hard to believe it was gluten-free and dairy-free, as it didn't compromise on taste at all. I highly recommend Good Harvest bakery to anyone looking for delicious, allergy-friendly treats. Thank you for making such a fantastic cake that everyone enjoyed, regardless of their dietary restrictions!

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04
Hy-Vee Grocery Store

Hy-Vee Grocery Store

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3801 E Washington Ave, Madison, WI 53704, USA

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Katherine Fetter

Very excited to see such a vast selection of gluten free foods with reasonable prices!

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05
Trader Joe's

Trader Joe's

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12665 W Bluemound Rd, Brookfield, WI 53005, USA

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Travis (Doughboy_Food_Reviews)

Cinnamon Coffee Cake Muffins (gluten free): I've never really understood the Trader Joe's "hype", but these were brought into the office by a co-worker and I love free snacks. Trader Joe's muffin has a fair amount of cinnamon sugar both on top and inside their muffin. The sugar granules add a welcomingly light crunch to the muffin as well as additional sweetness. When it comes to cinnamon I'm not a fan of "burning" in your face cinnamon. Thankfully this was a very mild and sweet cinnamon flavor. The texture was pleasantly chewy and moist, just about perfect for a muffin. Some might be drawn to this muffin for the gluten free aspect, but I could care less. Most importantly, it tasted like a normal/non gluten free bakery item. If you have to eat GF then this is a must try. For everyone else, this is comparable to a typical bakery coffee cake muffin. I added some cinnamon frosting and a cinnamon dessert spread to mine to take it up a notch and it went from being good to phenomenal. Regardless of your dietary needs, these muffins are Doughboy approved. Doughboy_Food_Reviews

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