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The 32 Best Gluten-Free Seafood Spots in San Diego

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By Gluten Free Eats' gluten-free community

Updated Jun 2025

01
Meze Greek Fusion

Meze Greek Fusion

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Celiac friendly

345 Sixth Ave, San Diego, CA 92101, USA

GF OptionsTacosMexicanDeliveryDinnerPet FriendlyMediterraneanOpen Late NightLunchOutdoor SeatingVegan OptionsVegetarian OptionsFriesSeafoodCeliac FriendlyBreakfastBrunchTake AwayBar
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Cynthia Jetson

BEWARE. The Gluten Free (GF) Labels on the menu mean GF options available for that dish, NOT that the dish is gluten free. Talk to your server about your order. I was excited when seeing the GF labels all over the menu, especially when seeing that most of those dishes involved pita bread. Sadly after talking to the bartender I learned that their pita is (obviously) not GF. Their rice pilaf also has soy sauce in it, so do not just assume the dish is GF even though they are labeled GF. Service was great and the food was good. Pricey, but normal for the gaslamp area and it was very tasty.

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02
Civico 1845

Civico 1845

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Gluten-free options

1845 India St, San Diego, CA 92101, USA

GF OptionsVegan FriendlyVegetarian OptionsItalianSeafoodBreakfastLunchDinnerBrunchOpen LateDeliveryTake AwayPet FriendlyOutdoor SeatingKid Friendly
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Malia Faith

Gluten-free pasta is not celiac safe (shared pasta water). Entrees like the salmon can be made 100% gluten-free.

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03
The Fish Market - San Diego

The Fish Market - San Diego

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Celiac friendly

3 Tuna Ln, San Diego, CA 92101, USA

100% Gluten FreeGF OptionsSeafoodAllergen FriendlyDairy Free OptionsDinnerKid FriendlyLunchOutdoor SeatingTake AwayBeerCasualCeliac FriendlyDeliveryBarBrunch
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Jeremiah Hoehner

Very good, fresh seafood with a beautiful view of the Bay, and a short walk from the USS Midway. They can make several dishes and sides gluten-free. Be sure to communicate that with your server. Our server was well-trained on this food allergen. Recommended to make reservations, especially if you want a table outside or a table inside with the bay view.

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04
Island Prime

Island Prime

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Celiac friendly

880 Harbor Island Dr, San Diego, CA 92101, USA

GF OptionsSeafoodAllergen FriendlyDinnerKid FriendlyAmericanCeliac FriendlyLunchBrunchOpen LateDeliveryTake AwayOutdoor SeatingBar
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Dale Huntington

Got to go here for a gift and loved all the gluten free options. They even made us gluten free toast. The meat was so tender and I loved the 3 different 3 ounce steaks with the different toppings. Especially the crab. If we were to splurge again, we would definitely go back. And of course the view is gorgeous.

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05
Pueblo

Pueblo

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Accommodating

877 Hornblend St, San Diego, CA 92109, USA

MexicanSeafoodVegan OptionsGF OptionsDinnerLunchVegetarian OptionsTacosBrunchDeliveryTake AwayPet FriendlyOutdoor SeatingKid Friendly
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Lawrence Talahongva

From the outside looking in it looked very elegant and nice but once inside it's a mass of chatter and some tables even yelling to just have a simple conversation. It's an open atrium, so naturally that allows flying critters to accompany your meal. You could not have a nice quiet dinner. The menu has limited gluten free options but some are available but as with any place the possibility of cross contamination is always a possibility. Our server was very polite and knowledgeable with the menu options. Food was slow to come out but tasted very good.

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