Top 16 Gluten-Free Burger Joints to Relish in San Diego

Your curated guide to gluten-free dining options, with detailed reviews and recommendations for safe celiac-friendly meals.

Evolution

2965 Fifth Ave, San Diego, CA 92103, USA
Gluten Free IconAccommodating Gluten-Free
MexicanBread ItemsBurgersDessertsTacosLunchDinnerVeganGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyVegetarian
Enjoy a relaxing vibe on the shaded dog-friendly patio, where tasty options keep you coming back for more.

People are saying
View more
Anna Kapliienko
Anna Kapliienko
atmosphere is really nice. food was just delicious. a lot of gluten free options. lasagna is worth trying

Menu
View menu

True Food Kitchen

7007 Friars Rd Suite 394, San Diego, CA 92108, USA
Gluten Free IconCeliac friendly
CocktailsAmericanVegan OptionsAllergen FriendlyBreakfastBrunchDairy Free OptionsDeliveryDinnerPet FriendlyKid FriendlyLunchOutdoor SeatingTake AwayVegetarian OptionsBeerBread ItemsBurgersDessertsSandwichesGF Options Marked on MenuKnowledgeable StaffCasualMediterraneanDedicated GF Fryer
With a spacious and eco-chic vibe, this spot is perfect for relaxed meals, featuring unique dishes and thoughtful service that makes you feel valued.

People are saying
View more
William  Silva
William Silva
best salad and potatoes !

Menu
View menu
Gluten-free options are marked

Bivouac Ciderworks

3986 30th St, San Diego, CA 92104, USA
Gluten Free IconCeliac friendly
Dairy Free OptionsVegan OptionsVegetarian OptionsDedicated GF FryerDinnerCocktailsCiderTacosFriesBurgersBread ItemsKid FriendlyPet FriendlyOutdoor SeatingTake AwayOpen LateLunchBrunchDeliveryBarRestaurant
A cozy spot with an adventurous decor theme, offering a vast range of delicious ciders and a fun ambiance for everyone!

People are saying
View more
Madi sun
Madi sun
We went here on a slow evening and sat at the bar. We ordered a cider and the gluten free chicken tinders and fries, I asked the bartender about the fryer and she assured me that it was completely gluten free and no chance of cross contamination. The $15 chicken tinders and fries were just okay, the chicken was dark meat which I thought was kinda gross and cheap for chicken tinders. Then I got violently ill later that evening and knew I had been glutened. 2 days later and I’m still recovering, don’t eat here if you have celiac. Also i definitely wish I would’ve checked Find me gluten-free reviews before I came.

Menu
View menu
Gluten-free options are marked

Thanh Tinh Chay Restaurant

4591 El Cajon Blvd, San Diego, CA 92115, USA
Gluten Free IconAccommodating Gluten-Free
Vegan OptionsAllergen FriendlyAsianDairy Free OptionsDinnerLunchVegetarian OptionsBread ItemsBurgersDessertsFriesPancakesSushiBreakfastDeliveryTake AwayKid FriendlyDedicated GF Fryer
Discover a vibrant eatery serving delicious vegan dishes, where every menu item impresses, making it a must-visit for diverse dietary needs.

People are saying
View more
Tim Street
Tim Street
This place is fantastic. I have celiac and a wheat/oat allergy and the staff was knowledgeable about all allergens for menu items. I had no bad reactions to the food afterward. The food is delicious too - I'm an omnivore who eats vegan/vegetarian a decent amount. It stands amongst some of my favorite restaurants ever (non vegan included). Did not think it being vegan detracted from flavor whatsoever. Highly recommend, especially if you have gluten sensitivity.

Menu
View menu

In-N-Out Burger

3102 Sports Arena Blvd, San Diego, CA 92110, USA
Gluten Free IconAccommodating Gluten-Free
Dedicated GF FryerLunchDinnerOpen LateAmericanBurgersGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyRestaurant
Dive into a classic West Coast fast food vibe with a bustling atmosphere and unique lettuce wrap options for a satisfying experience.

People are saying
View more
Bill Scully
Bill Scully
You got to love in n out. And you can get a Gluten free version. They use crisp lettuce in place of the bun. It’s a fast food place like McDonalds, busy, loud, but the food is 5x better.

Menu
View menu

The Melt

8849 Villa La Jolla Dr, La Jolla, CA 92037, USA
Gluten Free IconAccommodating Gluten-Free
LunchDinnerBrunchOpen LateBurgersDeliveryTake AwayPet FriendlyOutdoor SeatingKid FriendlyBread Items
With unique menu options and a focus on accommodating requests, this spot offers quick service and a delightful atmosphere for a casual outing.

People are saying
View more
Gabriel Moise
Gabriel Moise
This place is great and they have gluten free options. Karina is the best!!

Menu
View menu

True Food Kitchen

4301 La Jolla Village Dr Suite 2045, San Diego, CA 92122, USA
Gluten Free IconCeliac friendly
BurgersCocktailsAmericanVegan OptionsAllergen FriendlyBrunchDairy Free OptionsDinnerPet FriendlyKid FriendlyLunchOutdoor SeatingTake AwayVegetarian OptionsBeerBread ItemsDessertsSandwichesGF Options Marked on MenuKnowledgeable StaffCasualBreakfastMediterraneanDelivery
A top spot for health-conscious diners, offering a vibrant menu with many flavorful options that everyone can enjoy in a lively atmosphere.

People are saying
View more
Jen Johnson
Jen Johnson
The food was wonderful. It's hard to find a restaurant that has good gluten free options that the kids and adults will all like. Our waiter wasn't the friendliest, but when there was an issue with some chicken that had been ordered, handled it quickly and notified the manager who was very quick to resolve this issue. Would definitely recommend.

Menu
View menu
Gluten-free options are marked

Cali "O" Burgers

1290 University Ave, San Diego, CA 92103, USA
Gluten-free options
LunchDinnerOpen LateBurgersDeliveryTake AwayPet FriendlyOutdoor SeatingKid FriendlyRestaurant
A favorite local spot with quality ingredients where the beef steals the show, perfect for treating yourself amidst a cozy ambiance.

People are saying
View more
Blaine Jester
Blaine Jester
Update: bumped 4 to 5 stars after reflecting how much I'll miss Cali-O as I move elsewhere Original: This place is one of my go to spots living in NP. It's on the pricier side, but I really think it's reflected in the taste because the ingredients are quite good. The beef is the star and if you get a fancy burger, it will be overshadowed by the extra stuff. I get the GF bun and sweet potato fries and have never had any feeling of gluten contamination!

Menu
View menu

Coaster Saloon

744 Ventura Pl, San Diego, CA 92109, USA
Gluten Free IconCeliac friendly
GrillAmericanAllergen FriendlyDairy Free OptionsDinnerPet FriendlyKid FriendlyLunchOutdoor SeatingTake AwayBread ItemsBurgersCasualBeerGF Options Marked on MenuBreakfastBrunchOpen LateDelivery
With a beachy vibe, cozy seating, and scrumptious BBQ, this spot is perfect for hangouts and sunsets, plus great service all around!

People are saying
View more
Madi sun
Madi sun
My server was very knowledgeable on celiac disease and helped me pick out stuff to eat. I didn’t get sick here which was amazing however it is a bar setting so for anyone who has gluten allergies I’d just go off the vibe of your server/bartender

Menu
View menu
Gluten-free options are marked

Burger Lounge

1101 Wall St, La Jolla, CA 92037, USA
Gluten Free IconAccommodating Gluten-Free
LunchDinnerOpen LateBurgersGrab & GoDeliveryTake AwayPet FriendlyOutdoor SeatingKid FriendlyVegetarian
Casual vibes and tasty vegetarian options make this spot a hidden gem for those seeking delicious meals and unique plant-based treats.

People are saying
View more
Tina Stephens
Tina Stephens
Gluten free options Non-diary milkshakes available Vegan cheese too! The foods are AMAZING and the staff are super friendly.

Menu
View menu

Shake Shack Mission Valley

675 Camino De La Reina, San Diego, CA 92108, USA
Gluten Free IconAccommodating Gluten-Free
LunchDinnerOpen LateBurgersGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyPet FriendlyBread ItemsDesserts
This spot is known for its amazing takeaway, delivering delicious options and standout shakes that everyone loves.

People are saying
View more
mussil julie
mussil julie
Great friendly service!! So happy and thankful they have gluten-free options.

Menu
View menu

Del's Hideout

5351 Adobe Falls Rd, San Diego, CA 92120, USA
Gluten Free IconAccommodating Gluten-Free
AmericanAllergen FriendlyDairy Free OptionsDinnerPet FriendlyKid FriendlyLunchOutdoor SeatingTake AwayVegan OptionsVegetarian OptionsBread ItemsBurgersSandwichesBreakfastBrunchDeliveryBar
Dog-friendly patio vibes and a delightful play area for kids make this spot a memorable BBQ destination with amazing flavors.

People are saying
View more
Jessica Vroman
Jessica Vroman
Pleasantly surprised when we picked this place last minute. Food was DELICIOUS (gluten free brisket sandwhich and a burger) and to top it off we didnt know there was a small little outdoor play area for the kiddos!!! Saving this location for the couple times a year we are in the area!!

Menu
View menu
Gluten-free options are marked

Burger Lounge

4116 Adams Ave, San Diego, CA 92116, USA
Gluten-free options
LunchDinnerBurgersDeliveryTake AwayPet FriendlyOutdoor SeatingKid Friendly

People are saying
View more
Jan Slack
Jan Slack
I've eaten an Burger Lounge for many years and love the food. Have been craving their turkey burger all week and finally ordered it tonight. I was horribly disappointed. The burger patty was so thin, only about 1/8 inch thick. Could hardly taste any basil in the patty. Got a gluten free bun and that was huge. The entire burger was VERY dry, hard to eat. This is the 2nd time I've had unsatisfactory food from this location. In the future I'll try a different location to see if it's any better, but not this location again.

Menu
View menu

Shake Shack Little Italy

2008 India St, San Diego, CA 92101, USA
Gluten Free IconAccommodating Gluten-Free
BurgersAmericanGrab & GoKid FriendlyOpen Late NightLunchTake AwayAllergen FriendlyIce CreamDinnerDeliveryPet FriendlyOutdoor SeatingBread ItemsDesserts
Charming spot with limited parking, creative shakes, and tasty burgers that keep customers coming back for more.

People are saying
View more
Rishi Raj Gupta
Rishi Raj Gupta
Aurora and her team is just amazing and super helpful. They were so considerate in making sure my meal is gluten free.

Menu
View menu

Burger Lounge

1608 India St, San Diego, CA 92101, USA
Gluten Free IconAccommodating Gluten-Free
LunchDinnerOpen LateBurgersGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyPet Friendly
A go-to spot for fresh, quick bites with genuine service and unique perks like free fries on Mondays—definitely worth a stop!

People are saying
View more
Hailey Evans
Hailey Evans
I work a few blocks away and often order lunch from here on days I need something quick and close by. Today, Alejandro recognized me from a couple weeks ago and was SO nice! He asked me how my workday was going and suggested a little extra caffeine tea to help get me through my day. He genuinely seemed interested in how I was doing, and it was so kind! It's little moments like that in your day that make a big difference. Alejandro deserves a great review. Also, side note, the food here is SO fresh and they have great Gluten Free options. :) Highly recommend!

Menu
View menu

Werewolf

627 Fourth Ave, San Diego, CA 92101, USA
Gluten Free IconAccommodating Gluten-Free
BrunchBreakfastDinnerOpen Late NightLunchTake AwayBread ItemsBurgersPancakesDeliveryPet FriendlyOutdoor SeatingBar
Experience solid vibes and a creative brunch menu with impressive drinks and a welcoming atmosphere — a true gem in the Gaslamp District!

People are saying
View more
Amy Reed
Amy Reed
Werewolf American Pub in San Diego's Gaslamp District is a must-visit! Their brunch, served daily until 3 PM, is top-notch, offering a variety of delicious options. The menu features elevated pub fare with unique twists on traditional brunch items, making each dish memorable. They also offer a fantastic selection of gluten-free items, including GF buns and GF pancakes, ensuring everyone can enjoy their amazing food. We especially enjoyed their cocktails — they have a great menu featuring both classic favorites and creative, unique drinks that are perfect for any occasion. A special shoutout to Fiona, who was absolutely the best server! Her friendly hospitality vibe, impressive gluten-free knowledge, and attentive service made our experience even better. Plus, they offer $12 flat-rate parking with validation at the Horton Plaza Garage for up to 3 hours. Highly recommend checking it out!

Menu
View menu

Islands Restaurant Mission Valley

2441 Fenton Pkwy, San Diego, CA 92108, USA
Gluten Free IconAccommodating Gluten-Free
GrillBurgersAmericanDairy Free OptionsDinnerKid FriendlyLunchTake AwayBread ItemsOpen LateDelivery
Expect quick service and tasty options, with a standout Hawaiian burger that keeps fans coming back for more.

People are saying
View more
iris amaya
iris amaya
I love this place always fast service amazing food and great taste, for me Hawaii burguer is the best!! but they also have blue cheese burger and some gluten free options as well I always ordered the Hawaiian burger with teriyaki sauce on the side definitely coming back

Menu
View menu

Flap Your Jacks

3020 University Ave, San Diego, CA 92104, USA
Gluten-free options
BrunchBreakfastDairy Free OptionsLunchOutdoor SeatingBread ItemsBurgersPancakesDinnerDeliveryTake AwayPet FriendlyKid Friendly
Great spot for pancake lovers to customize their breakfast experience, offering unique batters and a fun DIY vibe.

People are saying
View more
Haylee Jane Monteiro
Haylee Jane Monteiro
Actually came here for Yelp event and took an order to go. It was just the plain Buttermilk Pancakes and Whipped Mascarpone topping. I actually wanted the red velvet pancakes but they don't have those to go to avoid any cross-contamination on their griddles at the back. The custom flavors are only available for stove top. To go orders were for gluten-free or buttermilk pancakes only. That said I actually really loved even those buttermilk pancakes so I can only imagine how good the red velvet must be! Just the right amount of sweet and I didn't even need to add any toppings on it. Mascarpone was perfectly smooth and delicious on its own as well. Really looking forward to coming here and making my own pancakes sometime soon.

Menu
View menu

Parkhouse Eatery

4574 Park Blvd, San Diego, CA 92116, USA
Gluten-free options
AmericanBrunchBreakfastDinnerLunchOutdoor SeatingBread ItemsBurgersPastaDeliveryTake AwayPet FriendlyKid Friendly
Expect a chill vibe, quick text alerts for seat openings, and a fantastic breakfast in this charming spot with lovely outdoor seating.

People are saying
View more
Sam L
Sam L
Fantastic breakfast! The food was delicious, prices were reasonable, and it's a charming, laid-back spot. This casual breakfast eatery offers lovely outdoor seating, and their cafe drinks are always good. Accommodates dietary restrictions: Gluten-free options are clearly labeled.

Menu
View menu

Gaslamp Burger

738 Fifth Ave, San Diego, CA 92101, USA
Gluten-free options
LunchDinnerBurgersDeliveryTake AwayOutdoor SeatingKid FriendlyPet Friendly
Experience a charming atmosphere with awesome vibes, making it a must-visit spot during your San Diego adventures.

People are saying
View more
Tom Green
Tom Green
This place has a charming and delightful atmosphere! The food was delicious; I opted for the Gaslamp Lounge burger with a gluten-free bun and fries, and it exceeded my expectations. Finding a place with a gluten-free bun was a challenge, so I was pleased that they offered it. If I find myself in San Diego again, I will definitely be stopping in.

Menu
View menu

Burger Lounge

406 University Ave, San Diego, CA 92103, USA
Gluten-free options
LunchDinnerBurgersGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyRestaurantPet Friendly

People are saying
View more
Lexi Bellows
Lexi Bellows
STAFF MADE FUN OF ME AND MY FOOD ALLERGIES. STAFF MADE WRONG ORDER TWICE WITH NO APOLOGY OR DISCOUNT OFFERED. STAFF RAISED VOICES AT US IN A RUDE AND AGGRESSIVE MANNER. I was a big Burger Lounge fan! As someone with a lot of food issues, Crohn's Disease, this place has always been a safe place to eat. Not anymore! I was there today June 21 around 3:30. I gave my order at the front, which is a little un conventional, im allergic to bread and lettuce so I just asked for a turkey burger with no cheese, no bread, and no lettuce. The person taking my order immediately walked over to another worker, whispered in her ear, and then they both looked at me and started laughing and whispering while looking directly at me, and I heard them talking about my order. I approached saying I have allergies to gluten, dairy, and lettuce and thats why my order is weird. They laughed again and continued whispering. Made me feel stupid, small, and belittled. They brought out a beef burger but Im allergic to beef! My friend went back inside and reorderd for me and reminded them: no cheese, no bread, no lettuce, turkey burger. A new staff member brought me a turkey burger with cheese. When I expaliend that I cannot eat cheese, this staff member was MEAN. Her response was "well I guess you didnt tell the people up front then." and then rolled her eyes. We explained that we did tell them, and this was the 2nd time the order was wrong. She grabbed it angirly from me and walked to the door. She started RAISING HER VOICE LOUD at us that we msut have not said no cheese. Then she states the manager would come and talk to us. Manager never showed. They BROUGH the right food and we left. I did NOT feel comfy speaking to a manager considering how RUDE and DISRESPECTFUL all the other staff members were.

Menu
View menu

Smashburger

6061 El Cajon Blvd Suite 2, San Diego, CA 92115, USA
Gluten-free options
BreakfastLunchDinnerBurgersGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyPet FriendlyRestaurant
Known for its delicious gourmet burgers and a variety of options, this place delivers a consistently satisfying experience with a clean vibe.

People are saying
View more
Cameron Hardman
Cameron Hardman
Amazing service- Feli is great! The fries were crispy, the burgers were perfect. Even their gluten free buns are so good

Menu
View menu

Crazee Burger

3993 30th St, San Diego, CA 92104, USA
Gluten-free options
BreakfastLunchDinnerOpen LateBurgersDeliveryTake AwayOutdoor SeatingKid Friendly
Unexpectedly cozy spot with unique flavors and amazing in-house BBQ sauce that keeps fans coming back for more in North Park.

People are saying
View more
Denise Denise
Denise Denise
I'm surprised this place wasn't more crowded. The food was DELICIOUS, unuque (if that's what you want) and reasonably priced. Even the traditional fare, like my friend and I had (if you want to call a terducken burger 'traditional') were cooked to perfection and tasted just really really good. They had 3 options for the buns: brioche, gluten-free, or vegan. I had my burger animal style though because we couldn't determine if any of the buns were soy-free. Their BBQ sauce is though - they make it in house & it's pretty tasty too. Whenever I go through North Park, I'll definitely come here again.

Menu
View menu

Bare Back Grill

4640 Mission Blvd, San Diego, CA 92109, USA
Gluten Free IconCeliac friendly
BreakfastLunchDinnerBrunchOpen LateGrab & GoDeliveryTake AwayPet FriendlyOutdoor SeatingKid FriendlyDedicated GF FryerBread ItemsBurgersFriesCocktailsVegetarianBarRestaurant
Enjoy a lively atmosphere with attentive service, unique in-house sauces, and a vibe that makes it easy to relax and enjoy your time.

People are saying
View more
Malia Faith
Malia Faith
Burgers with gluten free fries

Menu
View menu
Gluten-free options are marked

Burger Lounge

16490 Paseo Del Sur #105, San Diego, CA 92127, USA
Gluten Free IconAccommodating Gluten-Free
LunchDinnerBurgersGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyPet Friendly

People are saying
View more
Mike Honcho
Mike Honcho
The best burger. Get gluten reduced beer back!

Menu
View menu

The Habit Burger Grill

4175 Genesee Ave, San Diego, CA 92111, USA
Gluten-free options
LunchDinnerBurgersGrab & GoDeliveryTake AwayOutdoor SeatingKid FriendlyRestaurant

People are saying
View more
Andrea Zonca
Andrea Zonca
They make all burgers gluten free !

Menu
View menu

Corvette Diner

2965 Historic Decatur Rd, San Diego, CA 92106, USA
Gluten Free IconAccommodating Gluten-Free
BurgersAmericanDinnerKid FriendlyLunchVegetarian OptionsVegan OptionsBread ItemsBrunchOpen LateDeliveryTake Away
Bustling spot with legendary waiter-performed shows, kid-friendly with a playground & arcade machines for that perfect 50's vibe party.

People are saying
View more
Kaitlynn Marks
Kaitlynn Marks
Richie was amazing! The dancing was so fun!! We love the shakes and the gluten free menu!!!!

Menu
View menu

Shake Shack Westfield UTC

4309 La Jolla Village Dr, San Diego, CA 92122, USA
Gluten-free options
LunchDinnerBurgersGrab & GoDeliveryTake AwayPet FriendlyOutdoor SeatingKid FriendlyBread ItemsDesserts
Experience top-tier service and a clean vibe that makes every visit feel special, ensuring a cozy and welcoming atmosphere every time.

People are saying
View more
Moriah Scott
Moriah Scott
This visit today was no different than any other visit I have had at this location every time my family and I come here. It was such an excellent experience!! The place is so clean. Everyone is so kind and helpful. Today my daughter and I dined in and I had mistakenly ordered my burger without a gluten-free bun and they were so kind and just immediately made me one with a gluten-free bun and brought it to our table. I didn’t have to leave the table and I sat with my daughter. I was also given a free refill with my root beer and I didn’t even have to go up and ask for the refill. They did that for me from my table. Ron was such a helpful person today as were two other employees, but I did not catch their names. Again every time we have visited this location they give us top-tier service and it is a wonderful location to eat at. We will keep coming back. Thank you!

Menu
View menu

Hayes Burger

2060 Logan Ave Ste. A, San Diego, CA 92113, USA
Gluten-free options
LunchDinnerBurgersDeliveryTake AwayPet FriendlyOutdoor SeatingKid Friendly

People are saying
View more
M Lenz
M Lenz
It's a simple burger joint, in the best way possible. The burger->just the right amount of greasy, nice beef flavor, perfectly grilled onions, and something with a little spicy kick. It was exactly what I like. I am normally gluten free, my guts just don't like it when I eat it(not Ciliac's). But this was such the ideal burger I will happily come back dispite any discomfort later. Which is the best endorsement I can give

Menu
View menu

Islands Restaurant Mira Mesa

10669 Westview Pkwy, San Diego, CA 92126, USA
Gluten Free IconAccommodating Gluten-Free
GrillBurgersAmericanDinnerKid FriendlyOpen Late NightLunchAllergen FriendlyTake AwayBread ItemsDeliveryOutdoor Seating
Renowned for its sensational mocktails (think strawberry margaritas & piña coladas) and intriguing touch of island influence.

People are saying
View more
Karen Marsh
Karen Marsh
Very disappointed with Islands!!! I really enjoyed their sweet potato fries, but they are no longer a gluten free restaurant. They now use all fryers with non-gluten free foods & no longer separate the fryers or grills. They stopped their gluten free menu. 😢 I won’t be back.

Menu
View menu

The Food Box

978 Garnet Ave, San Diego, CA 92109, USA
Gluten-free options
BreakfastLunchDinnerBrunchBurgersDeliveryTake AwayPet FriendlyOutdoor SeatingKid FriendlyRestaurant
Known for an explosion of flavor and tempting sides, this spot keeps burger lovers coming back for more delicious experiences.

People are saying
View more
Gwyn Thompson
Gwyn Thompson
If you are in wanting an absolutely delicious burger.. make your way to PB San Diego! Overflowing with flavor. Spurgeon is my favorite . The spice and sauces is unbeatable! We got truffle fries last night and came back again today - tried the onion rings. Both are amazing! Gluten free bun for me- fantastic 👍🏻

Menu
View menu

© 2025 Atly - Your Local Guide to Gluten-Free Dining