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The 28 Best Gluten-Free Cafés in San Diego

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By Gluten Free Eats' gluten-free community

Updated May 2025

01
Snooze, an A.M. Eatery

Snooze, an A.M. Eatery

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Accommodating

8861 Villa La Jolla Dr #509, La Jolla, CA 92037, USA

GF OptionsBreakfastDedicated GF MenuVegan Friendly100% Gluten FreeVegetarian OptionsCasualKid FriendlyPancakesBread ItemsAmericanKnowledgeable StaffLunchBrunchDeliveryTake AwayPet FriendlyOutdoor SeatingBarCafeCocktails
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Ariane Laxo

Absolutely delicious! Most menu options can be made gluten free.

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Dedicated gluten-free menu
02
Caffè Calabria

Caffè Calabria

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Accommodating

3933 30th St Suite 2, San Diego, CA 92104, USA

GF OptionsItalianPizza100% Gluten FreeBreakfastLunchDinnerOpen LateCafeCocktailsDeliveryTake AwayPet FriendlyOutdoor Seating
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Marcel Fafard

Caffe Calabria is one of my new favorites. The gluten free pizza here is the best I've ever had. Amazing bar, and coffee roasting on site.

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GF options marked
03
Trilogy Sanctuary

Trilogy Sanctuary

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100% Dedicated Gluten-Free

7650 Girard Ave #400, La Jolla, CA 92037, USA

GF OptionsSmoothiesTacosMexicanDedicated GF Menu100% Gluten FreeDairy Free Options100% GF RestaurantAllergen FriendlyVegan OptionsVegetarian OptionsSeparate OvenKnowledgeable StaffDedicated GF Kitchen SpaceDedicated GF FryerDinnerLunchBreakfastCeliac Friendly100% GFBrunchCafeDeliveryTake AwayPet FriendlyOutdoor SeatingKid FriendlyRestaurant
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Steps User361422

Great gluten free options as well as dairy free since the restaurant is vegan too!

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Dedicated gluten-free menu
04
Phatties Bake Shop

Phatties Bake Shop

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Celiac friendly

4143 Voltaire St, San Diego, CA 92107, USA

CasualKid FriendlyTake AwayDessertsVegan OptionsGF Options Marked on MenuGF OptionsCeliac FriendlyBakeryBread ItemsBagelsSandwichesAllergen FriendlyDairy FreeCafeBrunchBreakfastLunchVegetarianOutdoor SeatingDeliveryPet Friendly
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Malia Faith

Gluten free desserts

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Gluten-free options are marked
05
Snooze, an A.M. Eatery

Snooze, an A.M. Eatery

Gluten Free Icon

Accommodating

3940 Fifth Ave, San Diego, CA 92103, USA

GF OptionsCocktailsBrunchBreakfastAllergen FriendlyDairy Free OptionsDeliveryKid FriendlyLunchOutdoor SeatingTake AwayVegan OptionsVegetarian OptionsBeerBread ItemsPancakesCafeKnowledgeable StaffCasualAmericanSandwichesBarPet Friendly
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Arda Akman

Great food, perfect portions. Gluten free options for almost everything. One of the best gluten free food options around.

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Gluten-free options are marked

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