Top 20 Gluten-Free Bagel Shops Across New York City

138 W 31st St, New York, NY 10001, USA
Gluten Free IconCeliac friendly
DeliveryKid FriendlyLunchTake AwayDinner
This restaurant features a modern, aesthetically pleasing interior with a cozy, quiet atmosphere ideal for gluten-free diners. The friendly, attentive staff ensure safe, naturally gluten-free options, making it a trusted haven for celiacs seeking delicious meals in a comfortable setting.

People are saying
View more
Dafne Abdala
Dafne Abdala
I asked about celiac safe food and they confirmed everything came in contact with gluten, cross contamination, made in the same space and same utinsils, not recommended por celiacs

Menu
View menu
Dedicated gluten-free menu

472 Columbus Ave, New York, NY 10024, USA
Gluten Free Icon100% Dedicated Gluten-Free
DeliveryKid FriendlyLunchTake AwayDinner
This intimate spot offers a welcoming space for gluten-free patrons with heated outdoor seating and a cozy bench. The polite, gracious staff ensure a caring experience, making it a true gluten-free haven appreciated by the celiac community.

People are saying
View more
Ivonne H
Ivonne H
Tuna bagel yum! Cheese and bacon also a winner! Gluten free pastries very good! Cashier awesome!

Menu
View menu
Dedicated gluten-free menu

139 W 14th St, New York, NY 10011, USA
Gluten Free Icon100% Dedicated Gluten-Free
DeliveryKid FriendlyLunchTake AwayBreakfast
This spot wows with delicious treats that redefine gluten-free indulgence, leaving both dedicated fans and newcomers thrilled.

People are saying
View more
Jenna Hogan
Jenna Hogan
Amazing GF bagels and sweet treats 😋

Menu
View menu
Dedicated gluten-free menu

683 9th Ave, New York, NY 10036, USA
Gluten Free IconCeliac friendly
DeliveryKid FriendlyLunchTake AwayDinner
This intimate eatery features a cozy backyard gazebo-like space and adorable outdoor seating surrounded by potted plants, creating a warm, inviting atmosphere ideal for a gluten-free and vegan brunch. The elegant environment and kind service enhance the experience.

People are saying
View more
Carina Fourmyle
Carina Fourmyle
Great options for vegan brunch. Although the vegan BLT was unexpectedly sweet, the quality of the food was excellent.i would return to try another vegan dish. Recommended for groups with various dietary needs (vegan, gluten free, nut free, etc). Service was great!

Menu
View menu
Gluten-free options are marked

New York, NY 10003, USA
Gluten Free Icon100% Dedicated Gluten-Free
DeliveryTake AwayBread ItemsBakeryDesserts
Nestled in a bustling greenmarket, this bakery offers a warm, welcoming atmosphere with a focus on gluten-free, additive-free treats crafted from locally sourced, high-quality ingredients. The owner’s care and the nutritious whole grain flours create a truly special experience for gluten-free patrons.

People are saying
View more
Britt Covello
Britt Covello
Best gluten free, refined sugar free, dairy free bakery in the world!!!!!! I get their GF sourdough bread every week and freeze it so it keeps for months. Sarah, the owner, is attentive and super sweet. She cares so much about her food and what goes into it.

Menu
View menu
Dedicated gluten-free menu

1427 3rd Ave, New York, NY 10028, USA
Gluten Free Icon100% Dedicated Gluten-Free
DeliveryKid FriendlyLunchTake AwayDinner
Offering a mouthwatering selection of baked goods and pizza, this spot is a must-try, though takeout only and some order mix-ups are common.

People are saying
View more
Tarri Klecha
Tarri Klecha
Amazing gluten free bagel!

Menu
View menu
Dedicated gluten-free menu

294 3rd Ave, Brooklyn, New York, United States
Gluten Free Icon100% Dedicated Gluten-Free
DeliveryKid FriendlyTake AwayBread ItemsVegetarian
This intimate bakery offers a cozy, home kitchen atmosphere with warm, friendly service from the knowledgeable owner. The setting feels personal and inviting, making it a hidden gem for gluten-free patrons seeking a welcoming experience.

People are saying
View more
Madora Conti
Madora Conti
What a sweet bakery; the owner and workers were very kind and accommodating. Dedicated gluten free bakeries are tough to find, but this one is awesome!

Menu
View menu
Dedicated gluten-free menu

165 Avenue A, New York, NY 10009, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryLunchBreakfastBrunchBread Items
This lively spot buzzes with energy and features a friendly atmosphere with charming wall art and cozy seating. Known for its wide variety of gluten-free options, it offers a welcoming setting for those seeking delicious gluten-free bagels and a vibrant neighborhood vibe.

People are saying
View more
Apoorva Hurakadli
Apoorva Hurakadli
Best gluten free bagels I’ve had! I tried the Blueberry Cream Cheese and The Danz, both were absolutely delicious. Must try!

Menu
View menu
Gluten-free options are marked

107 University Pl, New York, NY 10003, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryLunchTake AwayOutdoor SeatingRestaurant
A cozy cafe with a relaxed vibe, popular for its solid brunch options, busy atmosphere, and unique drinks like lavender lattes.

People are saying
View more
Neil Frutuoso
Neil Frutuoso
I thought the breakfast sandwich was great, they definitely use fresh ingredients. The wife got an avocado toast and the egg was a bit undercooked, over easy is ok but the white wasn’t cooked and when broken it leaked a clearish liquid. They do have an assortment of gluten free baked goods but if you have celiac please note they are cross contaminated which they lady behind the counter told us.

Menu
View menu
Gluten-free options are marked

58 W 36th St., New York, NY 10018, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryTake AwayBreakfastBread ItemsBakery
This spot offers a quiet atmosphere perfect for savoring gluten-free options. While the gluten-free bagels are notable for their texture, the shared preparation space means they are not celiac-safe. The small indoor and window seating enhances a calm, casual experience.

People are saying
View more
Silvia Pensa
Silvia Pensa
Just to make people aware that fully gluten-free options are not available, rather low-gluten options. Important in case of coeliac people, I'd advise to go elsewhere. Keen to flag given many reviews stated gluten-free, it's not quite that.

Menu
View menu
Gluten-free options are marked

3601 Fieldston Rd, Bronx, NY 10463, USA
Gluten Free Icon100% Dedicated Gluten-Free
DeliveryKid FriendlyLunchTake AwayPizza
A hidden gem in the Bronx with a welcoming vibe, amazing baked creations, and plenty of unique goodies to explore – definitely worth a visit!

People are saying
View more
Chris M
Chris M
Excellent gluten free treats! The lady working was very friendly and informative. It was a little pricey, but you can tell the ingredients are quality.

Menu
View menu

240 W 40th St, New York, New York, United States
Gluten Free IconAccommodating Gluten-Free
DeliveryKid FriendlyLunchTake AwayBreakfast
With a fantastic variety of delicious bagels and plenty of plant-based options, this spot is a must-visit for bagel lovers!

People are saying
View more
silvia casal
silvia casal
Very nice also they make bagels gluten free. 🔝💯

Menu
View menu
Gluten-free options are marked

1664 Richmond Rd, Staten Island, NY 10304, USA
Gluten Free IconCeliac friendly
DeliveryLunchTake AwayBreakfastBrunch
This bright, immaculate spot offers a wonderful, clean atmosphere with friendly, attentive staff who respect each other. The gluten-free options are clearly labeled and well separated, creating a safe and welcoming environment for gluten-free diners.

People are saying
View more
Dhurata T
Dhurata T
Pregnancy Craving Fulfilled — GF Bagel Heaven! I came in with a very specific pregnancy craving—a gluten-free everything bagel with egg, cheese, and pastrami—and they nailed it. It’s SO hard to find GF bagels, let alone ones this delicious. They also had a great variety of gluten-free muffins, cookies, and snacks, which was such a pleasant surprise. The staff was incredibly kind and attentive, and their iced coffee hit the spot too.

Menu
View menu

370 Lexington Ave, New York, NY 10017, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryTake AwayBreakfastBread ItemsBakery
This spacious, newly remodeled shop features a bright interior with high ceilings and varied seating, creating a calm yet lively atmosphere ideal for enjoying freshly baked gluten-free bagels. The helpful staff enhance the experience, making it a top choice for gluten-free options.

People are saying
View more
Natacha Burin
Natacha Burin
I had the Classic Bec, and if you love bacon you must try it! They have honey on the sauce in napkins and ketchup session, and I added honey to my bagel, just perfect! And they have gluten free bagels and vegan salmon, as my friend had it and loved it!

Menu
View menu

103 N 7th St, Brooklyn, NY 11249, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryLunchTake AwayBreakfastCafe
This cozy cafe blends a homey family vibe with modern convenience through electronic kiosks and outdoor seating on a quiet street. Known for its mission-driven atmosphere and friendly staff, it offers a welcoming setting ideal for those seeking gluten-free and vegan options in a uniquely inviting space.

People are saying
View more
Jana Ivkovic
Jana Ivkovic
The gluten free bagel was insanely good!!!! Best gluten free bagel in NYC hands down. I had to do a double take and make sure I was indeed eating a gluten free bagel - it tasted thag good! The ladies are very friendly and created a lovely atmosphere.

Menu
View menu
Gluten-free options are marked

184 2nd Ave, New York, New York, United States
Gluten Free IconAccommodating Gluten-Free
DeliveryBreakfastBread ItemsVegetarianVegan
This spot offers a welcoming atmosphere with ample indoor and outdoor seating, featuring walls adorned with painted art that create a comfortable, family-friendly vibe. The team is known for being kind and efficient, enhancing the experience for those seeking gluten-free options in a vibrant setting.

People are saying
View more
KJ Halpern
KJ Halpern
I’m Gluten-free and have never had a GF bagel this good!!! Usually GF bagels are too small and don’t have enough filling but it was the opposite here! Thank you so much!!!

Menu
View menu

214 Berry St, Brooklyn, NY 11249, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryBreakfastBread ItemsDessertsBagels
This spot offers a hip vibe with dog-friendly outdoor seating under umbrella-covered tables, creating an inviting atmosphere. Friendly staff and quick service enhance the experience, making it a welcoming place for those seeking gluten-free options in a lively setting.

People are saying
View more
Brigid Cash
Brigid Cash
best gluten free bagel in the neighborhood!

Menu
View menu

2350 Broadway, New York, New York, United States
Gluten Free IconAccommodating Gluten-Free
DeliveryBreakfastBread ItemsBakeryDesserts
This cozy shop offers a warm, inviting atmosphere with both indoor and outdoor seating, making it a pleasant spot for those seeking gluten-free options. The friendly staff provide attentive service despite busy crowds, enhancing the overall experience for gluten-free diners.

People are saying
View more
Emily Gervais
Emily Gervais
Gluten free bagel Homemade, chewy, fab What you’ve been missing

Menu
View menu

1361 6th Ave, New York, NY 10019, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryKid FriendlyLunchDinnerOutdoor Seating
This stylish diner near Central Park offers a lively, authentic NYC atmosphere with friendly, helpful staff and awesome service. Its outdoor seating is perfect for people watching, making it a great spot for a gluten-free dining experience with fresh, quick service.

People are saying
View more
Marcus Bögl
Marcus Bögl
The Astro Restaurant is a stylish diner near Central Park. Having breakfast there is an experience. The owner is very friendly as is his family. The food is fresh and prepared quickly. The coffee is delicious and hot. There is also gluten-free food. However, the prices are very high in comparison. Still an experience and therefore fully recommended.

Menu
View menu

463 W Broadway, New York, NY 10012, USA
Gluten Free IconCeliac friendly
DeliveryKid FriendlyLunchTake AwayDinner
Luxurious space with a vibrant atmosphere offering the city's best gluten-free bagels.

People are saying
View more
Julia Summers
Julia Summers

Menu
View menu

136 Lawrence St, Brooklyn, NY 11201, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryKid FriendlyLunchTake AwayDinner
You’ll be amazed by the incredible bagels here, especially the toasted sesame—definitely a must-try for bagel lovers!

People are saying
View more
Chris G
Chris G
Don’t say you’re gluten free when you also admit your items aren’t safe for people with celiac. Scummy and absurd. Be better.

Menu
View menu

252 Schermerhorn St, Brooklyn, NY 11217, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryTake AwayBreakfastBread ItemsDesserts
This intimate spot offers a cozy, well-decorated space with counter seating, creating a welcoming atmosphere. Known for its thoughtfully prepared gluten-free options, the staff is extremely friendly and careful, ensuring a safe and positive experience for those with gluten allergies.

People are saying
View more
Versatile V
Versatile V
Divine Montreal-style bagels. My top choice was the Classic 2.0, opted to sub the pastrami-spiced salmon for regular salmon. It’s worth the $15 you’ll pay. Loved the pickled green tomato. My friend enjoyed a gluten-free plain bagel and hot honey butter. The restaurant is just counter space and a little tight.

Menu
View menu

1229 1st Ave, New York, NY 10065, USA
Gluten Free IconCeliac friendly
DeliveryTake AwayBreakfastBread ItemsDesserts
This bagel shop offers an energetic, authentic atmosphere with visible bagel boiling and baking, plus a large outdoor seating area for a relaxed experience. They provide separate gluten-free options and a variety of choices, though celiac safety is a concern for some visitors.

People are saying
View more
Lib Cal
Lib Cal
Amazing bagels with great vegan and gluten free options. Tofu spread and vegan sausage were definitely the highlights. They are really filling as well! Staff is lovely :)

Menu
View menu
Gluten-free options are marked

170 Elizabeth St, New York, New York, United States
Gluten Free IconAccommodating Gluten-Free
DeliveryRestaurantBreakfastBread ItemsBakery
This spot offers a cozy interior with wooden paneling and built-in benches, creating a welcoming atmosphere for those seeking gluten-free options. The lively vibe, enhanced by classic tunes, complements the experience, making it a notable choice for gluten-free diners.

People are saying
View more
Mai Kronborg
Mai Kronborg
Gluten-free bagel dry as sand and not heated enough. Cappucino was awful. Think if you are not gluten allergic and order black coffee it might be better.

Menu
View menu

500 6th Ave, New York, New York, United States
Gluten Free IconAccommodating Gluten-Free
DeliveryTake AwayBreakfastCafeBread Items
This deli-style spot features a turn-of-the-century storefront and an authentic cozy atmosphere with an original painted antique white tin ceiling. Despite limited seating, the outdoor picnic tables offer a casual space, making it a welcoming choice for those seeking a gluten-free friendly environment.

People are saying
View more
Inés Martínez
Inés Martínez
My first ever bagel!! Loved the place, multiple of options on the menu plus gluten free buns 😍

Menu
View menu

23 E 17th St, New York, New York, United States
Gluten Free IconAccommodating Gluten-Free
DeliveryBreakfastBread ItemsVegetarianVegan
This cozy, hip spot features an eclectic decor and a lively atmosphere perfect for enjoying a quick bite. Known for being conscious of cross contamination, it offers a variety of gluten-free bagels and snacks with multiple flavor options, making it a great choice for gluten-free diets.

People are saying
View more
Jonah Kowall
Jonah Kowall
I came by here early on a Saturday morning to pick up bagels and bring them back to my mother's. The cream cheese was very good. The bagels were excellent. And the smoked salmon was good too. They have gluten-free bagels and they're very expensive but they are good according to my sister. They also have dairy-free tofu cream cheese. A various varieties which my sister said was also very good.. would recommend

Menu
View menu

357 Grand St, Brooklyn, New York, United States
Gluten-free options
DeliveryKid FriendlyLunchTake AwayOutdoor Seating
This bright, spacious eatery offers a fun, colorful vibe with high ceilings and huge windows. The airy yet warm atmosphere complements its top-notch service and gluten-free, vegan, and vegetarian-friendly options, making it a welcoming spot for those with dietary needs.

People are saying
View more
Rebeca Guzman
Rebeca Guzman

Menu
View menu

30 Rockefeller Plaza Concourse Level, New York, NY 10111, USA
Gluten Free IconAccommodating Gluten-Free
DeliveryKid FriendlyLunchTake AwayBreakfast
This charming, tiny bagel shop nestled under Rockefeller Center offers a gluten-friendly atmosphere with fresh bagels and a small, efficient setting. While cross-contamination risks exist, the staff's efforts to accommodate gluten-free preferences make it a notable spot for those seeking gluten-friendly options.

People are saying
View more
Cecilia Pagliano
Cecilia Pagliano
Best bagels and gluten free option! But please why the staff (the one on the till actually) is so unfriendly that when I asked a question she just answered with the total price of my order… TWICE.

Menu
View menu

50 E 96th St, New York, NY 10128, USA
Gluten-free options
DeliveryTake AwayOutdoor SeatingBreakfastCafe
This compact spot features a top-tier street-forward design with classic white subway tiles and bold black-and-white contrasts. The carefully curated playlists and relaxed outdoor seating create a welcoming atmosphere, enhancing the experience for those seeking gluten-free dining in a stylish, attentive setting.

People are saying
View more
Gilberto ramos jr
Gilberto ramos jr
Just wanted an onion or garlic bagel, instead I got attitude and a $18 everything Gluten Free, gummy, hard nasty bagel. Beware there are several other shop with much better food and no attitude. PS the GF cost $4.00 regular bagel is $1.50.

Menu
View menu

566 Lorimer St, Brooklyn, New York, United States
Gluten-free options
DeliveryTake AwayBreakfastOpen LateBread Items
This spot is renowned for its gluten-free bagels, offering a smaller yet satisfying alternative to regular bagels. With a variety of vegan and vegetarian cream cheese options and a welcoming atmosphere, it stands out as one of Brooklyn's best for gluten-free bagel lovers.

People are saying
View more
AJ F.
AJ F.
Absolutely love this place - hands down one of the best gluten free bagels in Brooklyn! Deducting one star only because the gluten free bagel costs more but is significantly smaller than a regular bagel :/ (see picture) lots of vegan/vegetarian cream cheese options available as well! i would recommend the tofu scallion cream cheese

Menu
View menu

7510 3rd Ave, Brooklyn, New York, United States
Gluten-free options
DeliveryTake AwayBreakfastCafeBread Items
A fan-favorite for its variety of tasty and chunky bagels, this cool joint wraps sandwiches to perfection and also offers top-tier catering services.

People are saying
View more
Kelly Olson
Kelly Olson
I ordered a Gluten free abc bagel and a bacon egg and cheese, 2 bagels for $25, which I think is insanely priced for a brooklyn bagel that wasn’t even that good

Menu
View menu

© 2025 Atly - Your Local Guide to Gluten-Free Dining